Localization of tandemly repeated DMA sequences inArabidopsis thaliana
نویسندگان
چکیده
منابع مشابه
Evolution of Tandemly Repeated Sequences Through Duplication and Inversion
Given a phylogenetic tree T for a family of tandemly repeated genes and their signed order O on the chromosome, we aim to find the minimum number of inversions compatible with an evolutionary history of this family. This is the first attempt to account for inversions in an evolutionary model of tandemly repeated genes. We present a time-efficient branch-and-bound algorithm and show, using simul...
متن کاملTRAP: automated classification, quantification and annotation of tandemly repeated sequences
TRAP, the Tandem Repeats Analysis Program, is a Perl program that provides a unified set of analyses for the selection, classification, quantification and automated annotation of tandemly repeated sequences. TRAP uses the results of the Tandem Repeats Finder program to perform a global analysis of the satellite content of DNA sequences, permitting researchers to easily assess the tandem repeat ...
متن کاملTandemly repeated trinucleotides - comparative analysis.
Characteristics of 64 possible tandem trinucleotide repeats (TSSR) from Homo sapiens (hs), Mus musculus (mm) and Rattus norvegicus (rn) genomes are presented. Comparative analysis of TSSR frequency depending on their repetitiveness and similarity of the TSSR length distributions is shown. Comparative analysis of TSSR sequence motifs and association between type of motif and its length (n) using...
متن کاملThe tandemly repeated sequences of cartilage link protein contain the sites for interaction with hyaluronic acid
The ternary complex involving link protein (LP), proteoglycan monomer, and hyaluronic acid (HA) is an important component of the extracellular matrix of cartilage. LP contains tandemly repeated sequences that were tested for their ability to interact with HA. A solid-phase assay was developed in which LP could specifically bind to immobilized HA. Detection of LP was by means of an antiserum dir...
متن کاملP-element homologous sequences are tandemly repeated in the genome of Drosophila guanche.
In Drosophila guanche, P-homologous sequences were found to be located in a tandem repetitive array (copy number: 20-50) at a single genomic site. The cytological position on the polytene chromosomes was determined by in situ hybridization (chromosome O: 85C). Sequencing of one complete repeat unit (3.25 kilobases) revealed high sequence similarity between the central coding region comprising e...
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ژورنال
عنوان ژورنال: The Plant Journal
سال: 1991
ISSN: 0960-7412,1365-313X
DOI: 10.1111/j.1365-313x.1991.00159.x